Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Hacd1-201ENSMUST00000074854 926 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Gm10355-201ENSMUST00000097146 517 ntBASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Btbd2-201ENSMUST00000003434 3026 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Gm5364-201ENSMUST00000216789 889 ntBASIC21.72■■□□□ 1.07
Chd4Q6PDQ2 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Chd4Q6PDQ2 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC21.7■■□□□ 1.07
Chd4Q6PDQ2 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Chd4Q6PDQ2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC21.7■■□□□ 1.07
Chd4Q6PDQ2 Gm5867-201ENSMUST00000063197 592 ntBASIC21.7■■□□□ 1.07
Chd4Q6PDQ2 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Chd4Q6PDQ2 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
Chd4Q6PDQ2 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Chd4Q6PDQ2 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Ddx41-204ENSMUST00000224765 2199 ntBASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Chd4Q6PDQ2 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Gm8097-201ENSMUST00000117903 829 ntBASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 AC127349.1-201ENSMUST00000224590 266 ntBASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Chd4Q6PDQ2 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Gm15173-201ENSMUST00000122049 433 ntBASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Apof-201ENSMUST00000050901 1258 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Chd4Q6PDQ2 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Gm9172-201ENSMUST00000212092 954 ntBASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 AC159093.1-201ENSMUST00000227779 380 ntBASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Chd4Q6PDQ2 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Rarb-207ENSMUST00000225921 2756 ntBASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Gm37584-201ENSMUST00000193595 1290 ntBASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Chd4Q6PDQ2 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms