Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Scube3Q66PY1 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scube3Q66PY1 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.49■□□□□ 0.39
Scube3Q66PY1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Scube3Q66PY1 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Mir770-201ENSMUST00000103252 94 ntBASIC17.48■□□□□ 0.39
Scube3Q66PY1 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.48■□□□□ 0.39
Scube3Q66PY1 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Scube3Q66PY1 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Gm18421-201ENSMUST00000204122 625 ntBASIC17.47■□□□□ 0.39
Scube3Q66PY1 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Scube3Q66PY1 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.46■□□□□ 0.39
Scube3Q66PY1 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Gm29518-201ENSMUST00000190858 372 ntBASIC17.46■□□□□ 0.39
Scube3Q66PY1 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Scube3Q66PY1 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
Scube3Q66PY1 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms