Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col11a2Q64739 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col11a2Q64739 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Col11a2Q64739 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Col11a2Q64739 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC20.17■□□□□ 0.82
Col11a2Q64739 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC20.16■□□□□ 0.82
Col11a2Q64739 AC117588.1-201ENSMUST00000228510 999 ntBASIC20.16■□□□□ 0.82
Col11a2Q64739 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Col11a2Q64739 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Gm14701-201ENSMUST00000117156 348 ntBASIC20.16■□□□□ 0.82
Col11a2Q64739 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC20.16■□□□□ 0.82
Col11a2Q64739 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC20.16■□□□□ 0.82
Col11a2Q64739 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Col11a2Q64739 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col11a2Q64739 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
Col11a2Q64739 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col11a2Q64739 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col11a2Q64739 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col11a2Q64739 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col11a2Q64739 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
Col11a2Q64739 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
Col11a2Q64739 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col11a2Q64739 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Col11a2Q64739 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Col11a2Q64739 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Col11a2Q64739 Atat1-214ENSMUST00000149277 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.82
Col11a2Q64739 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col11a2Q64739 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Col11a2Q64739 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC20.14■□□□□ 0.81
Col11a2Q64739 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
Col11a2Q64739 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col11a2Q64739 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col11a2Q64739 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col11a2Q64739 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col11a2Q64739 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col11a2Q64739 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Col11a2Q64739 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC20.13■□□□□ 0.81
Col11a2Q64739 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Tomm20l-201ENSMUST00000021482 578 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Tspan18-201ENSMUST00000028646 1203 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Sgcd-201ENSMUST00000077221 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col11a2Q64739 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col11a2Q64739 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Tmem253-201ENSMUST00000100638 1234 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
Col11a2Q64739 Gm6858-201ENSMUST00000208582 1468 ntBASIC20.13■□□□□ 0.81
Col11a2Q64739 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Col11a2Q64739 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
Col11a2Q64739 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
Col11a2Q64739 Gm14057-201ENSMUST00000120631 482 ntBASIC20.12■□□□□ 0.81
Col11a2Q64739 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC20.12■□□□□ 0.81
Col11a2Q64739 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 Gm27321-201ENSMUST00000185021 205 ntBASIC20.12■□□□□ 0.81
Col11a2Q64739 Gm8655-201ENSMUST00000221159 852 ntBASIC20.12■□□□□ 0.81
Col11a2Q64739 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Col11a2Q64739 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.12■□□□□ 0.81
Col11a2Q64739 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Col11a2Q64739 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col11a2Q64739 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col11a2Q64739 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Col11a2Q64739 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC20.11■□□□□ 0.81
Col11a2Q64739 Gm5253-201ENSMUST00000187104 1025 ntBASIC20.11■□□□□ 0.81
Col11a2Q64739 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
Col11a2Q64739 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col11a2Q64739 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col11a2Q64739 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
Col11a2Q64739 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Col11a2Q64739 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col11a2Q64739 Gm13597-201ENSMUST00000121239 375 ntBASIC20.1■□□□□ 0.81
Col11a2Q64739 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col11a2Q64739 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Col11a2Q64739 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 17.3 ms