Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC21.04■□□□□ 0.96
Clcn1Q64347 Gm45203-201ENSMUST00000206384 1831 ntBASIC21.04■□□□□ 0.96
Clcn1Q64347 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn1Q64347 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn1Q64347 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn1Q64347 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn1Q64347 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn1Q64347 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn1Q64347 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Clcn1Q64347 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC21.03■□□□□ 0.96
Clcn1Q64347 Gm1818-201ENSMUST00000169406 1184 ntBASIC21.03■□□□□ 0.96
Clcn1Q64347 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn1Q64347 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
Clcn1Q64347 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC21.03■□□□□ 0.96
Clcn1Q64347 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Gm16499-203ENSMUST00000204633 2177 ntBASIC21.02■□□□□ 0.96
Clcn1Q64347 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC21.02■□□□□ 0.96
Clcn1Q64347 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC21.02■□□□□ 0.96
Clcn1Q64347 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Clcn1Q64347 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC21.02■□□□□ 0.95
Clcn1Q64347 Gm15743-202ENSMUST00000182690 1901 ntBASIC21.02■□□□□ 0.95
Clcn1Q64347 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn1Q64347 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Clcn1Q64347 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC21.01■□□□□ 0.95
Clcn1Q64347 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44357-201ENSMUST00000195897 142 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm19658-201ENSMUST00000196231 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44367-201ENSMUST00000196836 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44350-201ENSMUST00000197197 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44390-201ENSMUST00000197533 144 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44313-201ENSMUST00000198018 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44486-201ENSMUST00000198508 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44454-201ENSMUST00000198541 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44314-201ENSMUST00000199263 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44394-201ENSMUST00000199558 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44484-201ENSMUST00000199873 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44466-201ENSMUST00000200264 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Gm44359-201ENSMUST00000200671 138 ntBASIC21.01■□□□□ 0.95
Clcn1Q64347 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
Clcn1Q64347 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
Clcn1Q64347 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC21.01■□□□□ 0.95
Clcn1Q64347 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Clcn1Q64347 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn1Q64347 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC21■□□□□ 0.95
Clcn1Q64347 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn1Q64347 Inppl1-202ENSMUST00000165052 4730 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn1Q64347 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn1Q64347 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn1Q64347 Gm25925-201ENSMUST00000158314 306 ntBASIC21■□□□□ 0.95
Clcn1Q64347 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC21■□□□□ 0.95
Clcn1Q64347 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC21■□□□□ 0.95
Clcn1Q64347 Gm2651-201ENSMUST00000203560 838 ntBASIC21■□□□□ 0.95
Clcn1Q64347 Gm18206-201ENSMUST00000207027 926 ntBASIC21■□□□□ 0.95
Clcn1Q64347 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC21■□□□□ 0.95
Clcn1Q64347 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn1Q64347 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC21■□□□□ 0.95
Clcn1Q64347 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn1Q64347 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
Clcn1Q64347 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Clcn1Q64347 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn1Q64347 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn1Q64347 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn1Q64347 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Clcn1Q64347 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.99■□□□□ 0.95
Clcn1Q64347 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Clcn1Q64347 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
Clcn1Q64347 Zfp264-201ENSMUST00000208656 1563 ntBASIC20.99■□□□□ 0.95
Clcn1Q64347 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn1Q64347 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn1Q64347 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn1Q64347 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC20.99■□□□□ 0.95
Clcn1Q64347 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC20.99■□□□□ 0.95
Clcn1Q64347 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC20.99■□□□□ 0.95
Clcn1Q64347 AC161829.1-201ENSMUST00000220298 281 ntBASIC20.99■□□□□ 0.95
Clcn1Q64347 Tesc-201ENSMUST00000031304 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn1Q64347 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Clcn1Q64347 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms