Protein–RNA interactions for Protein: Q640N4

Zfp248, Zinc finger protein 248, mousemouse

Predictions only

Length 576 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zfp248Q640N4 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Zfp248Q640N4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Gm36858-201ENSMUST00000194501 2391 ntBASIC12.69□□□□□ -0.38
Zfp248Q640N4 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC12.69□□□□□ -0.38
Zfp248Q640N4 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Gm18958-201ENSMUST00000174258 762 ntBASIC12.69□□□□□ -0.38
Zfp248Q640N4 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Zfp248Q640N4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Il3ra-202ENSMUST00000223589 738 ntBASIC12.68□□□□□ -0.38
Zfp248Q640N4 Timm23-208ENSMUST00000226683 750 ntBASIC12.68□□□□□ -0.38
Zfp248Q640N4 AC154649.1-201ENSMUST00000227392 384 ntBASIC12.68□□□□□ -0.38
Zfp248Q640N4 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Gm26596-201ENSMUST00000180464 2655 ntBASIC12.68□□□□□ -0.38
Zfp248Q640N4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Zfp248Q640N4 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC12.68□□□□□ -0.38
Zfp248Q640N4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Zfp248Q640N4 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Gm27000-201ENSMUST00000182943 842 ntBASIC12.67□□□□□ -0.38
Zfp248Q640N4 Gm8520-201ENSMUST00000186517 868 ntBASIC12.67□□□□□ -0.38
Zfp248Q640N4 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.67□□□□□ -0.38
Zfp248Q640N4 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 AC120002.2-201ENSMUST00000220205 773 ntBASIC12.67□□□□□ -0.38
Zfp248Q640N4 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Zfp248Q640N4 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Zfp248Q640N4 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms