Protein–RNA interactions for Protein: Q62395

Tff3, Trefoil factor 3, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff3Q62395 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tff3Q62395 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC14.46□□□□□ -0.09
Tff3Q62395 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tff3Q62395 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tff3Q62395 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Tff3Q62395 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tff3Q62395 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Tff3Q62395 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Tff3Q62395 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Tff3Q62395 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tff3Q62395 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.1
Tff3Q62395 Zkscan4-202ENSMUST00000225845 1506 ntBASIC14.46□□□□□ -0.1
Tff3Q62395 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tff3Q62395 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Tff3Q62395 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Gm27357-201ENSMUST00000183754 135 ntBASIC14.45□□□□□ -0.1
Tff3Q62395 Ighv6-1-201ENSMUST00000193612 343 ntBASIC14.45□□□□□ -0.1
Tff3Q62395 Gm18421-201ENSMUST00000204122 625 ntBASIC14.45□□□□□ -0.1
Tff3Q62395 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.45□□□□□ -0.1
Tff3Q62395 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Tff3Q62395 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Tff3Q62395 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Tff3Q62395 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Tff3Q62395 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.44□□□□□ -0.1
Tff3Q62395 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Tff3Q62395 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC14.43□□□□□ -0.1
Tff3Q62395 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC14.43□□□□□ -0.1
Tff3Q62395 AL590614.2-201ENSMUST00000225374 1937 ntBASIC14.43□□□□□ -0.1
Tff3Q62395 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Tff3Q62395 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tff3Q62395 Gm15794-201ENSMUST00000120182 631 ntBASIC14.43□□□□□ -0.1
Tff3Q62395 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tff3Q62395 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC14.43□□□□□ -0.1
Tff3Q62395 Gm44450-201ENSMUST00000199528 114 ntBASIC14.43□□□□□ -0.1
Tff3Q62395 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC14.43□□□□□ -0.1
Tff3Q62395 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Tff3Q62395 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Tff3Q62395 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tff3Q62395 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Tff3Q62395 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Tff3Q62395 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tff3Q62395 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Tff3Q62395 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC14.42□□□□□ -0.1
Tff3Q62395 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Gfra2-202ENSMUST00000227633 1480 ntBASIC14.42□□□□□ -0.1
Tff3Q62395 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Tff3Q62395 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.41□□□□□ -0.1
Tff3Q62395 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.41□□□□□ -0.1
Tff3Q62395 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Tff3Q62395 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Tff3Q62395 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Tff3Q62395 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms