Protein–RNA interactions for Protein: Q62233

Six3, Homeobox protein SIX3, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six3Q62233 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
Six3Q62233 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
Six3Q62233 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Six3Q62233 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC16.3■□□□□ 0.2
Six3Q62233 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Gm27011-201ENSMUST00000182352 972 ntBASIC16.3■□□□□ 0.2
Six3Q62233 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Kctd6-202ENSMUST00000170111 3052 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Six3Q62233 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC16.29■□□□□ 0.2
Six3Q62233 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.29■□□□□ 0.2
Six3Q62233 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.29■□□□□ 0.2
Six3Q62233 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Six3Q62233 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Six3Q62233 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC16.29■□□□□ 0.2
Six3Q62233 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC16.29■□□□□ 0.2
Six3Q62233 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Six3Q62233 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.29■□□□□ 0.2
Six3Q62233 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.29■□□□□ 0.2
Six3Q62233 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC16.29■□□□□ 0.2
Six3Q62233 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
Six3Q62233 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Six3Q62233 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Six3Q62233 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.28■□□□□ 0.2
Six3Q62233 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC16.28■□□□□ 0.2
Six3Q62233 Odf3b-204ENSMUST00000227834 930 ntBASIC16.28■□□□□ 0.2
Six3Q62233 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Six3Q62233 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.28■□□□□ 0.2
Six3Q62233 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Six3Q62233 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
Six3Q62233 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Six3Q62233 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.27■□□□□ 0.2
Six3Q62233 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Six3Q62233 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Six3Q62233 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
Six3Q62233 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
Six3Q62233 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.27■□□□□ 0.2
Six3Q62233 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms