Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ctr9Q62018 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Ctr9Q62018 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Ctr9Q62018 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Ctr9Q62018 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ctr9Q62018 Nrbp1-207ENSMUST00000202576 2221 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
Ctr9Q62018 Nrbp1-201ENSMUST00000031034 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Ctr9Q62018 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC19.64■□□□□ 0.73
Ctr9Q62018 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctr9Q62018 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC19.64■□□□□ 0.73
Ctr9Q62018 Gm18421-201ENSMUST00000204122 625 ntBASIC19.64■□□□□ 0.73
Ctr9Q62018 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctr9Q62018 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctr9Q62018 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctr9Q62018 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.64■□□□□ 0.73
Ctr9Q62018 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC19.64■□□□□ 0.73
Ctr9Q62018 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.64■□□□□ 0.73
Ctr9Q62018 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctr9Q62018 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Ctr9Q62018 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Ctr9Q62018 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC19.63■□□□□ 0.73
Ctr9Q62018 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC19.63■□□□□ 0.73
Ctr9Q62018 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC19.63■□□□□ 0.73
Ctr9Q62018 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC19.63■□□□□ 0.73
Ctr9Q62018 Gm45328-201ENSMUST00000210942 917 ntBASIC19.63■□□□□ 0.73
Ctr9Q62018 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Ctr9Q62018 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.62■□□□□ 0.73
Ctr9Q62018 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ctr9Q62018 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.62■□□□□ 0.73
Ctr9Q62018 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ctr9Q62018 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
Ctr9Q62018 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC19.62■□□□□ 0.73
Ctr9Q62018 Gm29707-201ENSMUST00000196325 491 ntBASIC19.62■□□□□ 0.73
Ctr9Q62018 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Ctr9Q62018 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Ctr9Q62018 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.62■□□□□ 0.73
Ctr9Q62018 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.61■□□□□ 0.73
Ctr9Q62018 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC19.61■□□□□ 0.73
Ctr9Q62018 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Gm27742-201ENSMUST00000184667 60 ntBASIC19.61■□□□□ 0.73
Ctr9Q62018 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC19.61■□□□□ 0.73
Ctr9Q62018 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Ctr9Q62018 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Ctr9Q62018 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctr9Q62018 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctr9Q62018 Olfr129-201ENSMUST00000122318 993 ntBASIC19.6■□□□□ 0.73
Ctr9Q62018 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Ctr9Q62018 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctr9Q62018 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Ctr9Q62018 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Ctr9Q62018 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Gm15794-201ENSMUST00000120182 631 ntBASIC19.59■□□□□ 0.73
Ctr9Q62018 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.59■□□□□ 0.73
Ctr9Q62018 Otx2os1-206ENSMUST00000228153 787 ntBASIC19.59■□□□□ 0.73
Ctr9Q62018 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.59■□□□□ 0.73
Ctr9Q62018 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ctr9Q62018 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ctr9Q62018 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ctr9Q62018 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms