Protein–RNA interactions for Protein: Q61473

Sox17, Transcription factor SOX-17, mousemouse

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox17Q61473 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.7■□□□□ 0.1
Sox17Q61473 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Gm26571-201ENSMUST00000181399 666 ntBASIC15.7■□□□□ 0.1
Sox17Q61473 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Rab3c-203ENSMUST00000224180 967 ntBASIC15.7■□□□□ 0.1
Sox17Q61473 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
Sox17Q61473 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Sox17Q61473 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Sox17Q61473 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sox17Q61473 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Sox17Q61473 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sox17Q61473 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.69■□□□□ 0.1
Sox17Q61473 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.69■□□□□ 0.1
Sox17Q61473 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.69■□□□□ 0.1
Sox17Q61473 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Sox17Q61473 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox17Q61473 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Sox17Q61473 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox17Q61473 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sox17Q61473 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
Sox17Q61473 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sox17Q61473 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Sox17Q61473 Gm15375-201ENSMUST00000119510 849 ntBASIC15.68■□□□□ 0.1
Sox17Q61473 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox17Q61473 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Sox17Q61473 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC15.68■□□□□ 0.1
Sox17Q61473 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox17Q61473 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Sox17Q61473 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.68■□□□□ 0.1
Sox17Q61473 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox17Q61473 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox17Q61473 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox17Q61473 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Gm10138-203ENSMUST00000206952 366 ntBASIC15.67■□□□□ 0.1
Sox17Q61473 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Sox17Q61473 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.67■□□□□ 0.1
Sox17Q61473 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox17Q61473 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms