Protein–RNA interactions for Protein: Q61418

Clcn4, H(+)/Cl(-) exchange transporter 4, mousemouse

Predictions only

Length 747 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn4Q61418 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Clcn4Q61418 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Scrn2-201ENSMUST00000021249 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Clcn4Q61418 Rasip1-201ENSMUST00000057927 3202 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC15.38■□□□□ 0.05
Clcn4Q61418 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Clcn4Q61418 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.38■□□□□ 0.05
Clcn4Q61418 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Clcn4Q61418 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
Clcn4Q61418 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Gm26596-201ENSMUST00000180464 2655 ntBASIC15.38■□□□□ 0.05
Clcn4Q61418 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
Clcn4Q61418 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC15.37■□□□□ 0.05
Clcn4Q61418 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.37■□□□□ 0.05
Clcn4Q61418 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.37■□□□□ 0.05
Clcn4Q61418 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Clcn4Q61418 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC15.37■□□□□ 0.05
Clcn4Q61418 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Clcn4Q61418 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Clcn4Q61418 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Clcn4Q61418 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Nsl1-203ENSMUST00000139340 837 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.36■□□□□ 0.05
Clcn4Q61418 AC121577.1-201ENSMUST00000227302 707 ntBASIC15.36■□□□□ 0.05
Clcn4Q61418 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Clcn4Q61418 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Tfap2a-209ENSMUST00000225180 1828 ntBASIC15.36■□□□□ 0.05
Clcn4Q61418 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Clcn4Q61418 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.35■□□□□ 0.05
Clcn4Q61418 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Clcn4Q61418 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.35■□□□□ 0.05
Clcn4Q61418 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Clcn4Q61418 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.35■□□□□ 0.05
Clcn4Q61418 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.35■□□□□ 0.05
Clcn4Q61418 AC156016.1-201ENSMUST00000227190 1035 ntBASIC15.35■□□□□ 0.05
Clcn4Q61418 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Clcn4Q61418 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.35■□□□□ 0.05
Clcn4Q61418 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.35■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.5 ms