Protein–RNA interactions for Protein: Q61189

Clns1a, Methylosome subunit pICln, mousemouse

Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clns1aQ61189 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC14.32□□□□□ -0.12
Clns1aQ61189 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC14.32□□□□□ -0.12
Clns1aQ61189 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Clns1aQ61189 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Clns1aQ61189 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Klk9-201ENSMUST00000005891 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
Clns1aQ61189 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Dusp15-202ENSMUST00000109811 753 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.31□□□□□ -0.12
Clns1aQ61189 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.31□□□□□ -0.12
Clns1aQ61189 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Sp8-201ENSMUST00000063918 4478 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Clns1aQ61189 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Wnt10b-205ENSMUST00000226846 1204 ntBASIC14.3□□□□□ -0.12
Clns1aQ61189 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Gm9867-201ENSMUST00000192212 2647 ntBASIC14.3□□□□□ -0.12
Clns1aQ61189 Gm26657-201ENSMUST00000181745 1308 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Clns1aQ61189 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Clns1aQ61189 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC14.29□□□□□ -0.12
Clns1aQ61189 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Clns1aQ61189 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Clns1aQ61189 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Clns1aQ61189 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms