Protein–RNA interactions for Protein: Q60857

Slc6a4, Sodium-dependent serotonin transporter, mousemouse

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a4Q60857 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc6a4Q60857 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Slc6a4Q60857 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Senp3-202ENSMUST00000066760 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC17.05■□□□□ 0.32
Slc6a4Q60857 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 E2f7-205ENSMUST00000173634 827 ntTSL 2 BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.05■□□□□ 0.32
Slc6a4Q60857 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.05■□□□□ 0.32
Slc6a4Q60857 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Slc6a4Q60857 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Gm17971-201ENSMUST00000190239 806 ntBASIC17.04■□□□□ 0.32
Slc6a4Q60857 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.04■□□□□ 0.32
Slc6a4Q60857 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC17.04■□□□□ 0.32
Slc6a4Q60857 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
Slc6a4Q60857 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC17.03■□□□□ 0.32
Slc6a4Q60857 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Gm17092-201ENSMUST00000166606 698 ntTSL 2 BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.03■□□□□ 0.32
Slc6a4Q60857 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Slc6a4Q60857 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Pcdh7-201ENSMUST00000068110 5611 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Slc6a4Q60857 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a4Q60857 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
Slc6a4Q60857 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a4Q60857 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Slc6a4Q60857 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms