Protein–RNA interactions for Protein: Q60641

Nr1h4, Bile acid receptor, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1h4Q60641 Glis1-201ENSMUST00000046005 2906 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Nr1h4Q60641 Dancr-204ENSMUST00000132389 2347 ntBASIC15.91■□□□□ 0.14
Nr1h4Q60641 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Gm37292-201ENSMUST00000192062 758 ntBASIC15.91■□□□□ 0.14
Nr1h4Q60641 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Hivep3-201ENSMUST00000084306 2973 ntBASIC15.91■□□□□ 0.14
Nr1h4Q60641 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Nr1h4Q60641 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC15.9■□□□□ 0.14
Nr1h4Q60641 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Gm17661-201ENSMUST00000170317 270 ntBASIC15.9■□□□□ 0.14
Nr1h4Q60641 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Nr1h4Q60641 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Gm37025-201ENSMUST00000195159 829 ntBASIC15.89■□□□□ 0.13
Nr1h4Q60641 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Nr1h4Q60641 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
Nr1h4Q60641 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.88■□□□□ 0.13
Nr1h4Q60641 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Nr1h4Q60641 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms