Protein–RNA interactions for Protein: Q60611

Satb1, DNA-binding protein SATB1, mousemouse

Predictions only

Length 764 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Satb1Q60611 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC17.25■□□□□ 0.35
Satb1Q60611 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Satb1Q60611 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Satb1Q60611 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Satb1Q60611 Bicd2-201ENSMUST00000048544 6309 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
Satb1Q60611 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Satb1Q60611 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Satb1Q60611 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Satb1Q60611 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Satb1Q60611 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Satb1Q60611 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC17.24■□□□□ 0.35
Satb1Q60611 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.24■□□□□ 0.35
Satb1Q60611 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Satb1Q60611 Gm27702-201ENSMUST00000184512 56 ntBASIC17.24■□□□□ 0.35
Satb1Q60611 AC138767.1-201ENSMUST00000222661 415 ntBASIC17.24■□□□□ 0.35
Satb1Q60611 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Satb1Q60611 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC17.24■□□□□ 0.35
Satb1Q60611 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Satb1Q60611 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Satb1Q60611 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Satb1Q60611 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC17.23■□□□□ 0.35
Satb1Q60611 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Satb1Q60611 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC17.23■□□□□ 0.35
Satb1Q60611 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Satb1Q60611 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC17.23■□□□□ 0.35
Satb1Q60611 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 Adprh-201ENSMUST00000002923 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Satb1Q60611 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Satb1Q60611 Gm13401-201ENSMUST00000117074 291 ntBASIC17.22■□□□□ 0.35
Satb1Q60611 Gm15794-201ENSMUST00000120182 631 ntBASIC17.22■□□□□ 0.35
Satb1Q60611 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.22■□□□□ 0.35
Satb1Q60611 Gm8969-201ENSMUST00000199694 526 ntBASIC17.22■□□□□ 0.35
Satb1Q60611 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.22■□□□□ 0.35
Satb1Q60611 Gm9731-201ENSMUST00000209480 747 ntBASIC17.22■□□□□ 0.35
Satb1Q60611 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.22■□□□□ 0.35
Satb1Q60611 Il3ra-202ENSMUST00000223589 738 ntBASIC17.22■□□□□ 0.35
Satb1Q60611 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.22■□□□□ 0.35
Satb1Q60611 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.22■□□□□ 0.35
Satb1Q60611 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Satb1Q60611 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC17.21■□□□□ 0.35
Satb1Q60611 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Satb1Q60611 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Lpgat1-201ENSMUST00000110855 7233 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC17.21■□□□□ 0.35
Satb1Q60611 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Satb1Q60611 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC17.21■□□□□ 0.35
Satb1Q60611 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC17.21■□□□□ 0.35
Satb1Q60611 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Gm6736-201ENSMUST00000166583 948 ntBASIC17.21■□□□□ 0.35
Satb1Q60611 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Satb1Q60611 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Satb1Q60611 AC161829.1-201ENSMUST00000220298 281 ntBASIC17.21■□□□□ 0.35
Satb1Q60611 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Satb1Q60611 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.34
Satb1Q60611 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC17.2■□□□□ 0.34
Satb1Q60611 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Satb1Q60611 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms