Protein–RNA interactions for Protein: Q5SZ99

Trim38, Tripartite motif-containing 38, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim38Q5SZ99 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Trim38Q5SZ99 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Wnt10b-204ENSMUST00000226655 1807 ntBASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Gm13474-201ENSMUST00000122466 815 ntBASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Gm2274-201ENSMUST00000184539 609 ntBASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Trim38Q5SZ99 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Gm16061-201ENSMUST00000122167 857 ntBASIC17.27■□□□□ 0.36
Trim38Q5SZ99 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Gm9484-201ENSMUST00000195892 1159 ntBASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Trim38Q5SZ99 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim38Q5SZ99 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim38Q5SZ99 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
Trim38Q5SZ99 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim38Q5SZ99 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim38Q5SZ99 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.27■□□□□ 0.35
Trim38Q5SZ99 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Trim38Q5SZ99 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Trim38Q5SZ99 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Trim38Q5SZ99 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Trim38Q5SZ99 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms