Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Mir770-201ENSMUST00000103252 94 ntBASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Gm13186-201ENSMUST00000118031 316 ntBASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Gm11336-201ENSMUST00000118168 334 ntBASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 AC130713.1-201ENSMUST00000228853 1096 ntBASIC13.32□□□□□ -0.28
Trav2Q5R1I9 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Gm45244-201ENSMUST00000211328 2200 ntBASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Trav2Q5R1I9 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Gm45328-201ENSMUST00000210942 917 ntBASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Gm18115-201ENSMUST00000221209 621 ntBASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Trav2Q5R1I9 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Klf14-201ENSMUST00000101589 3056 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 AC154471.1-201ENSMUST00000224418 436 ntBASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Fcho2-208ENSMUST00000224992 2964 ntBASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Trav2Q5R1I9 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 AC121598.2-201ENSMUST00000228376 2325 ntBASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Trav2Q5R1I9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Trav2Q5R1I9 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms