Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Trav8d-1Q5R1H8 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Gm12896-201ENSMUST00000118430 226 ntBASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Gm15847-201ENSMUST00000121417 1065 ntBASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Kat2a-202ENSMUST00000103118 3046 ntAPPRIS P4 TSL 1 (best) BASIC13.72□□□□□ -0.21
Trav8d-1Q5R1H8 Ccnd3-215ENSMUST00000183044 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Gm21596-201ENSMUST00000178049 1316 ntBASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Trmt13-210ENSMUST00000198454 880 ntBASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Trav8d-1Q5R1H8 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.71□□□□□ -0.22
Trav8d-1Q5R1H8 AC154231.1-201ENSMUST00000220564 2175 ntBASIC13.71□□□□□ -0.22
Trav8d-1Q5R1H8 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8d-1Q5R1H8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Trav8d-1Q5R1H8 Rab22a-201ENSMUST00000029024 7155 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 AC112142.1-201ENSMUST00000228796 918 ntBASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Trav8d-1Q5R1H8 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Akt2-214ENSMUST00000167435 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Gm8520-201ENSMUST00000186517 868 ntBASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Wnt10b-205ENSMUST00000226846 1204 ntBASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Trav8d-1Q5R1H8 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms