Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC13.02□□□□□ -0.32
Trav15-1-dv6-1Q5R1D2 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm5408-201ENSMUST00000197998 747 ntBASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm42642-201ENSMUST00000200683 355 ntBASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm26524-201ENSMUST00000192339 390 ntBASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Mtag2-201ENSMUST00000058665 714 ntBASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm15375-201ENSMUST00000119510 849 ntBASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Gm43072-201ENSMUST00000200283 1671 ntBASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
Trav15-1-dv6-1Q5R1D2 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms