Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Scn2bQ56A07 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scn2bQ56A07 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.52■□□□□ 0.24
Scn2bQ56A07 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Scn2bQ56A07 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2bQ56A07 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Scn2bQ56A07 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2bQ56A07 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.23
Scn2bQ56A07 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2bQ56A07 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Scn2bQ56A07 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 AC175538.1-201ENSMUST00000225343 1269 ntBASIC16.51■□□□□ 0.23
Scn2bQ56A07 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.51■□□□□ 0.23
Scn2bQ56A07 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Scn2bQ56A07 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC16.5■□□□□ 0.23
Scn2bQ56A07 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.5■□□□□ 0.23
Scn2bQ56A07 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Scn2bQ56A07 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Mir6982-201ENSMUST00000184354 68 ntBASIC16.49■□□□□ 0.23
Scn2bQ56A07 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.49■□□□□ 0.23
Scn2bQ56A07 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.49■□□□□ 0.23
Scn2bQ56A07 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Scn2bQ56A07 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Gm27000-201ENSMUST00000182943 842 ntBASIC16.48■□□□□ 0.23
Scn2bQ56A07 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.48■□□□□ 0.23
Scn2bQ56A07 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Rbmxl1-201ENSMUST00000049245 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Scn2bQ56A07 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms