Protein–RNA interactions for Protein: Q4FZF3

Ddx49, Probable ATP-dependent RNA helicase DDX49, mousemouse

Known RBP Predictions only

Length 480 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx49Q4FZF3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Syngr2-206ENSMUST00000177131 935 ntAPPRIS ALT2 TSL 3 BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ddx49Q4FZF3 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Gm8000-201ENSMUST00000188378 592 ntBASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Gm18421-201ENSMUST00000204122 625 ntBASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Ddx49Q4FZF3 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx49Q4FZF3 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx49Q4FZF3 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx49Q4FZF3 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ddx49Q4FZF3 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Gm43332-201ENSMUST00000202511 1044 ntBASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Lzts2-201ENSMUST00000039016 2825 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx49Q4FZF3 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Gm15165-201ENSMUST00000118140 502 ntBASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx49Q4FZF3 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Gm12350-201ENSMUST00000121208 462 ntBASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Gm10060-201ENSMUST00000212002 111 ntBASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx49Q4FZF3 Dmtn-210ENSMUST00000228824 2377 ntBASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx49Q4FZF3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms