Protein–RNA interactions for Protein: Q3UV31

Rnf223, RING finger protein 223, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf223Q3UV31 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Rnf223Q3UV31 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Rnf223Q3UV31 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Smpdl3b-201ENSMUST00000030709 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Rnf223Q3UV31 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rnf223Q3UV31 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Rnf223Q3UV31 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Gm27741-201ENSMUST00000185060 237 ntBASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC16.14■□□□□ 0.17
Rnf223Q3UV31 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Osgin2-201ENSMUST00000037198 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Sqstm1-201ENSMUST00000015981 2673 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.13■□□□□ 0.17
Rnf223Q3UV31 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
Rnf223Q3UV31 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms