Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl5Q3UTQ8 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Cdkl5Q3UTQ8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl5Q3UTQ8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Cdkl5Q3UTQ8 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Actl10-202ENSMUST00000226583 1501 ntBASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Gm45058-201ENSMUST00000205810 766 ntBASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Gm18115-201ENSMUST00000221209 621 ntBASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Cdkl5Q3UTQ8 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Nudt8-202ENSMUST00000025802 787 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Cdkl5Q3UTQ8 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Gm8668-201ENSMUST00000120559 1447 ntBASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Mir1668-201ENSMUST00000184114 107 ntBASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Cdkl5Q3UTQ8 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Phf7-203ENSMUST00000226565 1971 ntBASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Cdkl5Q3UTQ8 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Cdkl5Q3UTQ8 Gfra2-202ENSMUST00000227633 1480 ntBASIC19.27■□□□□ 0.67
Cdkl5Q3UTQ8 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdkl5Q3UTQ8 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Cdkl5Q3UTQ8 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Cdkl5Q3UTQ8 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
Cdkl5Q3UTQ8 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Cdkl5Q3UTQ8 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms