Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Gm15442-201ENSMUST00000117905 1527 ntBASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Dhdds-203ENSMUST00000105886 1015 ntTSL 5 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Gm45747-201ENSMUST00000212203 999 ntBASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Pou2f2-205ENSMUST00000108417 1937 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Spg11Q3UHA3 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Spg11Q3UHA3 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Spg11Q3UHA3 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Spg11Q3UHA3 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.33■□□□□ 0.05
Spg11Q3UHA3 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Mrpl40-202ENSMUST00000119273 778 ntTSL 3 BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Fst-202ENSMUST00000223640 2612 ntBASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Mtmr2-209ENSMUST00000156801 617 ntTSL 5 BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
Spg11Q3UHA3 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Mir6990-201ENSMUST00000183724 91 ntBASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Gm27646-201ENSMUST00000183989 110 ntBASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Myef2-209ENSMUST00000152367 2071 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Gm7507-201ENSMUST00000183053 1008 ntBASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
Spg11Q3UHA3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Gm38342-201ENSMUST00000195710 2980 ntBASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Gm13597-201ENSMUST00000121239 375 ntBASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Gm45612-201ENSMUST00000211320 160 ntBASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Gm8655-201ENSMUST00000221159 852 ntBASIC15.31■□□□□ 0.04
Spg11Q3UHA3 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Gm8825-201ENSMUST00000182565 998 ntBASIC15.3■□□□□ 0.04
Spg11Q3UHA3 AC124732.2-201ENSMUST00000221977 316 ntBASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Espn-203ENSMUST00000070018 1618 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Spg11Q3UHA3 Mir6420-201ENSMUST00000185032 102 ntBASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Spg11Q3UHA3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms