Protein–RNA interactions for Protein: Q3TP92

Ctdnep1, CTD nuclear envelope phosphatase 1, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1Q3TP92 Fbxl3-201ENSMUST00000022720 4309 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Olfr1411-201ENSMUST00000073748 972 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Mff-212ENSMUST00000162003 2087 ntTSL 5 BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Ctdnep1Q3TP92 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC19.27■□□□□ 0.67
Ctdnep1Q3TP92 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Ctdnep1Q3TP92 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Ctdnep1Q3TP92 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
Ctdnep1Q3TP92 Slc35b2-202ENSMUST00000223987 1766 ntBASIC19.27■□□□□ 0.67
Ctdnep1Q3TP92 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Kcnq2-204ENSMUST00000103047 2899 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Gm13474-201ENSMUST00000122466 815 ntBASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Gm18115-201ENSMUST00000221209 621 ntBASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Ctdnep1Q3TP92 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Ctdnep1Q3TP92 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Gm45058-201ENSMUST00000205810 766 ntBASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Gm19569-202ENSMUST00000184658 1305 ntTSL 2 BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Ctdnep1Q3TP92 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Mir5130-201ENSMUST00000175160 84 ntBASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 AC153881.2-201ENSMUST00000214877 204 ntBASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Ctdnep1Q3TP92 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Ctdnep1Q3TP92 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms