Protein–RNA interactions for Protein: Q3TCH7

Cul4a, Cullin-4A, mousemouse

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cul4aQ3TCH7 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Cul4aQ3TCH7 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Pmepa1-201ENSMUST00000036248 4538 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Mir1199-201ENSMUST00000117015 119 ntBASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Cul4aQ3TCH7 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cul4aQ3TCH7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cul4aQ3TCH7 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cul4aQ3TCH7 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cul4aQ3TCH7 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cul4aQ3TCH7 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.52■□□□□ 0.39
Cul4aQ3TCH7 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 A230072E10Rik-203ENSMUST00000175942 2940 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Timm23-208ENSMUST00000226683 750 ntBASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cul4aQ3TCH7 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Ppp1r3f-205ENSMUST00000150787 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Gm15039-201ENSMUST00000118914 875 ntBASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Gm10653-202ENSMUST00000139570 835 ntBASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cul4aQ3TCH7 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 CT025689.6-201ENSMUST00000224991 1104 ntBASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cul4aQ3TCH7 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 AC153881.1-201ENSMUST00000214448 284 ntBASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Rasal2-201ENSMUST00000078308 10047 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cul4aQ3TCH7 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms