Protein–RNA interactions for Protein: Q2WF71

Lrfn1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, mousemouse

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrfn1Q2WF71 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Nrg1-218ENSMUST00000209107 2972 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Rab3c-203ENSMUST00000224180 967 ntBASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Lrfn1Q2WF71 AC093043.3-201ENSMUST00000226531 2273 ntBASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.47■□□□□ 0.07
Lrfn1Q2WF71 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 AC112142.1-201ENSMUST00000228796 918 ntBASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Lrfn1Q2WF71 Pcyt2-201ENSMUST00000026129 1881 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lrfn1Q2WF71 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lrfn1Q2WF71 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC15.46■□□□□ 0.06
Lrfn1Q2WF71 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Lrfn1Q2WF71 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.46■□□□□ 0.06
Lrfn1Q2WF71 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Fbxo47-201ENSMUST00000093939 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 a-202ENSMUST00000109697 705 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 AC160393.1-201ENSMUST00000218378 1279 ntBASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Ptbp2-213ENSMUST00000200097 3777 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Lrfn1Q2WF71 Tcp1-201ENSMUST00000089024 1902 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms