Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 AC140397.2-201ENSMUST00000224213 834 ntBASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Msl3l2-201ENSMUST00000063138 2140 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Mettl27-202ENSMUST00000068617 1685 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Gm27430-201ENSMUST00000184585 107 ntBASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Gm44333-201ENSMUST00000197168 107 ntBASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Tpd52l1-202ENSMUST00000213528 969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Pimreg-201ENSMUST00000021164 1513 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
Ush2AQ2QI47 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm38575-203ENSMUST00000215824 1490 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm5177-201ENSMUST00000183092 997 ntBASIC8.88□□□□□ -0.99
Ush2AQ2QI47 4933405L10Rik-202ENSMUST00000211852 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm13042-201ENSMUST00000119244 1955 ntBASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm7774-201ENSMUST00000200064 533 ntBASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm5784-201ENSMUST00000179344 2478 ntBASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Tcf3-203ENSMUST00000105339 2096 ntAPPRIS ALT2 TSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Ninj1-202ENSMUST00000120733 1321 ntTSL 5 BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
Ush2AQ2QI47 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gm11478-201ENSMUST00000117851 599 ntBASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Mir7684-201ENSMUST00000183858 60 ntBASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gm29791-202ENSMUST00000207888 369 ntBASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Polr2h-201ENSMUST00000021405 950 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Map7d2-203ENSMUST00000112471 3670 ntAPPRIS P3 TSL 5 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gm42922-201ENSMUST00000195887 2078 ntBASIC8.87□□□□□ -0.99
Ush2AQ2QI47 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Acyp2-201ENSMUST00000074613 863 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Bicdl1-204ENSMUST00000121746 1568 ntTSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Nudt18-203ENSMUST00000228768 1578 ntBASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC8.87□□□□□ -0.99
Ush2AQ2QI47 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC8.87□□□□□ -0.99
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms