Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Rprl2-201ENSMUST00000157150 290 ntBASIC14.89□□□□□ -0.03
Chd8Q09XV5 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.89□□□□□ -0.03
Chd8Q09XV5 Gnpda1-201ENSMUST00000063814 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Chd8Q09XV5 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Gm8602-201ENSMUST00000184045 607 ntBASIC14.88□□□□□ -0.03
Chd8Q09XV5 Gm17968-201ENSMUST00000194902 784 ntBASIC14.88□□□□□ -0.03
Chd8Q09XV5 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Fam71b-201ENSMUST00000063166 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.88□□□□□ -0.03
Chd8Q09XV5 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC14.88□□□□□ -0.03
Chd8Q09XV5 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Chd8Q09XV5 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Tnnt1-208ENSMUST00000166161 750 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Gm5682-201ENSMUST00000173402 505 ntBASIC14.87□□□□□ -0.03
Chd8Q09XV5 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC14.87□□□□□ -0.03
Chd8Q09XV5 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 AY702102-202ENSMUST00000194651 1173 ntBASIC14.87□□□□□ -0.03
Chd8Q09XV5 Gm6266-201ENSMUST00000203844 806 ntBASIC14.87□□□□□ -0.03
Chd8Q09XV5 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Cdc123-201ENSMUST00000043864 1827 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Trib3-201ENSMUST00000040312 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Chd8Q09XV5 Grk6-207ENSMUST00000225925 2769 ntBASIC14.87□□□□□ -0.03
Chd8Q09XV5 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Chd8Q09XV5 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC14.85□□□□□ -0.03
Chd8Q09XV5 Gm3786-201ENSMUST00000202659 378 ntBASIC14.85□□□□□ -0.03
Chd8Q09XV5 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC14.85□□□□□ -0.03
Chd8Q09XV5 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms