Protein–RNA interactions for Protein: Q07424

Cdx4, Homeobox protein CDX-4, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx4Q07424 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Gm13559-201ENSMUST00000120476 863 ntBASIC12.92□□□□□ -0.34
Cdx4Q07424 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Gm10231-201ENSMUST00000181584 441 ntBASIC12.92□□□□□ -0.34
Cdx4Q07424 Gm7889-201ENSMUST00000185591 958 ntBASIC12.92□□□□□ -0.34
Cdx4Q07424 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Gm10175-202ENSMUST00000208752 441 ntBASIC12.92□□□□□ -0.34
Cdx4Q07424 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC12.92□□□□□ -0.34
Cdx4Q07424 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC12.92□□□□□ -0.34
Cdx4Q07424 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC12.92□□□□□ -0.34
Cdx4Q07424 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC12.92□□□□□ -0.34
Cdx4Q07424 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Cdx4Q07424 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdx4Q07424 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Cdx4Q07424 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cdx4Q07424 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdx4Q07424 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Cdx4Q07424 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC12.91□□□□□ -0.34
Cdx4Q07424 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC12.91□□□□□ -0.34
Cdx4Q07424 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC12.91□□□□□ -0.34
Cdx4Q07424 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Cdx4Q07424 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC12.91□□□□□ -0.34
Cdx4Q07424 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC12.91□□□□□ -0.34
Cdx4Q07424 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Haglr-201ENSMUST00000100000 2085 ntBASIC12.9□□□□□ -0.34
Cdx4Q07424 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Gm18959-201ENSMUST00000208954 655 ntBASIC12.9□□□□□ -0.34
Cdx4Q07424 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Dnajc1-202ENSMUST00000091418 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Cacna2d2-202ENSMUST00000085092 5183 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Cdx4Q07424 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Cdx4Q07424 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cdx4Q07424 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cdx4Q07424 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Cdx4Q07424 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC12.89□□□□□ -0.35
Cdx4Q07424 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Gm37025-201ENSMUST00000195159 829 ntBASIC12.89□□□□□ -0.35
Cdx4Q07424 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdx4Q07424 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC12.89□□□□□ -0.35
Cdx4Q07424 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Cdx4Q07424 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 31.3 ms