Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Txnrd2-215ENSMUST00000206151 2874 ntAPPRIS P2 TSL 5 BASIC14.03□□□□□ -0.16
Npas1P97459 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Actn3-201ENSMUST00000006626 2880 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Npas1P97459 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Npas1P97459 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Npas1P97459 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Npas1P97459 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Npas1P97459 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Npas1P97459 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas1P97459 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC14.02□□□□□ -0.17
Npas1P97459 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Npas1P97459 Gm18671-201ENSMUST00000214826 683 ntBASIC14.02□□□□□ -0.17
Npas1P97459 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas1P97459 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas1P97459 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas1P97459 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas1P97459 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.17
Npas1P97459 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas1P97459 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Npas1P97459 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Npas1P97459 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Npas1P97459 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Npas1P97459 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC14.01□□□□□ -0.17
Npas1P97459 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Gm13401-201ENSMUST00000117074 291 ntBASIC14.01□□□□□ -0.17
Npas1P97459 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.01□□□□□ -0.17
Npas1P97459 Gm13620-201ENSMUST00000131198 511 ntTSL 3 BASIC14.01□□□□□ -0.17
Npas1P97459 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Npas1P97459 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC14.01□□□□□ -0.17
Npas1P97459 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Npas1P97459 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC14.01□□□□□ -0.17
Npas1P97459 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
Npas1P97459 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Npas1P97459 Gm37912-201ENSMUST00000191895 3076 ntBASIC14.01□□□□□ -0.17
Npas1P97459 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Npas1P97459 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Gm43272-201ENSMUST00000200599 1584 ntBASIC14□□□□□ -0.17
Npas1P97459 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14□□□□□ -0.17
Npas1P97459 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC14□□□□□ -0.17
Npas1P97459 Mief2-201ENSMUST00000018743 2522 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Gm2399-201ENSMUST00000104944 225 ntBASIC14□□□□□ -0.17
Npas1P97459 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC14□□□□□ -0.17
Npas1P97459 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Gm6365-201ENSMUST00000054711 744 ntBASIC14□□□□□ -0.17
Npas1P97459 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Npas1P97459 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC14□□□□□ -0.17
Npas1P97459 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Npas1P97459 AC154412.1-201ENSMUST00000226540 2786 ntBASIC14□□□□□ -0.17
Npas1P97459 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Npas1P97459 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC13.99□□□□□ -0.17
Npas1P97459 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC13.99□□□□□ -0.17
Npas1P97459 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Npas1P97459 Gm8839-201ENSMUST00000121279 1645 ntBASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms