Protein–RNA interactions for Protein: P97334

Nkx2-3, Homeobox protein Nkx-2.3, mousemouse

Predictions only

Length 362 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-3P97334 AC138767.1-201ENSMUST00000222661 415 ntBASIC20.99■□□□□ 0.95
Nkx2-3P97334 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nkx2-3P97334 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC20.98■□□□□ 0.95
Nkx2-3P97334 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-3P97334 Gm14261-201ENSMUST00000145105 1429 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-3P97334 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-3P97334 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-3P97334 Dnajb8-201ENSMUST00000061866 990 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Nkx2-3P97334 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-3P97334 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Nkx2-3P97334 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Gm8349-201ENSMUST00000182720 1003 ntBASIC20.97■□□□□ 0.95
Nkx2-3P97334 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nkx2-3P97334 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Nap1l1-201ENSMUST00000065917 1486 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Psmb1-201ENSMUST00000014913 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Gm10060-201ENSMUST00000212002 111 ntBASIC20.96■□□□□ 0.95
Nkx2-3P97334 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
Nkx2-3P97334 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Nkx2-3P97334 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-3P97334 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.95■□□□□ 0.94
Nkx2-3P97334 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Ch25h-201ENSMUST00000050562 1350 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Cyp21a1-201ENSMUST00000025223 2058 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Nkx2-3P97334 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-3P97334 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-3P97334 CT010456.1-201ENSMUST00000222465 1688 ntTSL 5 BASIC20.94■□□□□ 0.94
Nkx2-3P97334 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.94■□□□□ 0.94
Nkx2-3P97334 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-3P97334 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-3P97334 AC127349.1-201ENSMUST00000224590 266 ntBASIC20.94■□□□□ 0.94
Nkx2-3P97334 AC107711.5-202ENSMUST00000226429 702 ntBASIC20.94■□□□□ 0.94
Nkx2-3P97334 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-3P97334 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-3P97334 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-3P97334 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Nkx2-3P97334 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC20.93■□□□□ 0.94
Nkx2-3P97334 Slc9a6-201ENSMUST00000077741 4976 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Gm13418-201ENSMUST00000119097 944 ntBASIC20.93■□□□□ 0.94
Nkx2-3P97334 Gm7507-201ENSMUST00000183053 1008 ntBASIC20.93■□□□□ 0.94
Nkx2-3P97334 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Gm18856-201ENSMUST00000178096 1374 ntBASIC20.93■□□□□ 0.94
Nkx2-3P97334 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nkx2-3P97334 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Ten1-201ENSMUST00000021130 902 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Nkx2-3P97334 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms