Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Mllt10-204ENSMUST00000114680 3543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shox2P70390 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Shox2P70390 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC16.54■□□□□ 0.24
Shox2P70390 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC16.54■□□□□ 0.24
Shox2P70390 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shox2P70390 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shox2P70390 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shox2P70390 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shox2P70390 Large2-201ENSMUST00000068586 2445 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Shox2P70390 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Gbe1-203ENSMUST00000163832 2984 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Shox2P70390 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shox2P70390 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shox2P70390 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC16.53■□□□□ 0.24
Shox2P70390 Gm45417-201ENSMUST00000209533 758 ntBASIC16.53■□□□□ 0.24
Shox2P70390 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shox2P70390 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.53■□□□□ 0.24
Shox2P70390 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Flg-201ENSMUST00000050758 1488 ntBASIC16.53■□□□□ 0.24
Shox2P70390 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Shox2P70390 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Shox2P70390 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC16.53■□□□□ 0.24
Shox2P70390 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC16.53■□□□□ 0.24
Shox2P70390 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Shox2P70390 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Shox2P70390 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Gm6576-201ENSMUST00000169678 883 ntBASIC16.52■□□□□ 0.24
Shox2P70390 Gm27454-201ENSMUST00000185090 204 ntBASIC16.52■□□□□ 0.24
Shox2P70390 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.52■□□□□ 0.24
Shox2P70390 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
Shox2P70390 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Shox2P70390 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Shox2P70390 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shox2P70390 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC16.52■□□□□ 0.23
Shox2P70390 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shox2P70390 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Shox2P70390 CT010444.2-201ENSMUST00000217877 1629 ntBASIC16.52■□□□□ 0.23
Shox2P70390 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Shox2P70390 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Shox2P70390 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Shox2P70390 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.52■□□□□ 0.23
Shox2P70390 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Sort1-201ENSMUST00000102632 6796 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shox2P70390 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC16.51■□□□□ 0.23
Shox2P70390 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Polr2j-202ENSMUST00000111127 900 ntTSL 2 BASIC16.51■□□□□ 0.23
Shox2P70390 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Shox2P70390 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Shox2P70390 Ap3s1-204ENSMUST00000225520 957 ntBASIC16.51■□□□□ 0.23
Shox2P70390 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Shox2P70390 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
Shox2P70390 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC16.51■□□□□ 0.23
Shox2P70390 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.51■□□□□ 0.23
Shox2P70390 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Tfap2d-201ENSMUST00000037294 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Shox2P70390 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shox2P70390 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shox2P70390 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shox2P70390 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Shox2P70390 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shox2P70390 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Shox2P70390 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC16.5■□□□□ 0.23
Shox2P70390 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Shox2P70390 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
Shox2P70390 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms