Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Mir5130-201ENSMUST00000175160 84 ntBASIC13.88□□□□□ -0.19
Pdlim4P70271 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Pdlim4P70271 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Gm9987-201ENSMUST00000069768 567 ntBASIC13.88□□□□□ -0.19
Pdlim4P70271 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Pdlim4P70271 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC13.87□□□□□ -0.19
Pdlim4P70271 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC13.87□□□□□ -0.19
Pdlim4P70271 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Pdlim4P70271 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Gm16731-201ENSMUST00000132432 922 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Gm45058-201ENSMUST00000205810 766 ntBASIC13.86□□□□□ -0.19
Pdlim4P70271 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Pdlim4P70271 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.86□□□□□ -0.19
Pdlim4P70271 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
Pdlim4P70271 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.85□□□□□ -0.19
Pdlim4P70271 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Dancr-204ENSMUST00000132389 2347 ntBASIC13.85□□□□□ -0.19
Pdlim4P70271 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC13.85□□□□□ -0.19
Pdlim4P70271 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC13.85□□□□□ -0.19
Pdlim4P70271 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Pdlim4P70271 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.85□□□□□ -0.19
Pdlim4P70271 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Pdlim4P70271 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC13.85□□□□□ -0.19
Pdlim4P70271 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms