Protein–RNA interactions for Protein: P63058

Thra, Thyroid hormone receptor alpha, mousemouse

Predictions only

Length 492 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ThraP63058 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Gm24841-201ENSMUST00000158676 357 ntBASIC16.88■□□□□ 0.29
ThraP63058 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC16.88■□□□□ 0.29
ThraP63058 Gm29791-202ENSMUST00000207888 369 ntBASIC16.88■□□□□ 0.29
ThraP63058 Rgcc-201ENSMUST00000022595 918 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
ThraP63058 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.88■□□□□ 0.29
ThraP63058 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ThraP63058 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
ThraP63058 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
ThraP63058 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
ThraP63058 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
ThraP63058 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.87■□□□□ 0.29
ThraP63058 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.87■□□□□ 0.29
ThraP63058 Gm6345-202ENSMUST00000180900 204 ntBASIC16.87■□□□□ 0.29
ThraP63058 Gm4217-201ENSMUST00000182243 1002 ntBASIC16.87■□□□□ 0.29
ThraP63058 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC16.87■□□□□ 0.29
ThraP63058 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 Golga7b-201ENSMUST00000087123 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
ThraP63058 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
ThraP63058 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ThraP63058 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC16.86■□□□□ 0.29
ThraP63058 Gm43272-201ENSMUST00000200599 1584 ntBASIC16.86■□□□□ 0.29
ThraP63058 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.86■□□□□ 0.29
ThraP63058 Gm16061-201ENSMUST00000122167 857 ntBASIC16.86■□□□□ 0.29
ThraP63058 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.86■□□□□ 0.29
ThraP63058 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
ThraP63058 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.86■□□□□ 0.29
ThraP63058 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
ThraP63058 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Gm7638-201ENSMUST00000121348 967 ntBASIC16.85■□□□□ 0.29
ThraP63058 Gm22697-201ENSMUST00000175194 63 ntBASIC16.85■□□□□ 0.29
ThraP63058 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.85■□□□□ 0.29
ThraP63058 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
ThraP63058 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
ThraP63058 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
ThraP63058 Gm7791-201ENSMUST00000219066 539 ntBASIC16.84■□□□□ 0.29
ThraP63058 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
ThraP63058 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
ThraP63058 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
ThraP63058 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms