Protein–RNA interactions for Protein: P63006

Lhx1, LIM/homeobox protein Lhx1, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx1P63006 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC16.39■□□□□ 0.21
Lhx1P63006 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.39■□□□□ 0.21
Lhx1P63006 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC16.39■□□□□ 0.21
Lhx1P63006 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Gfra2-202ENSMUST00000227633 1480 ntBASIC16.39■□□□□ 0.21
Lhx1P63006 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
Lhx1P63006 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Lhx1P63006 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.38■□□□□ 0.21
Lhx1P63006 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Lhx1P63006 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC16.38■□□□□ 0.21
Lhx1P63006 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Lhx1P63006 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.37■□□□□ 0.21
Lhx1P63006 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
Lhx1P63006 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.37■□□□□ 0.21
Lhx1P63006 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.37■□□□□ 0.21
Lhx1P63006 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.37■□□□□ 0.21
Lhx1P63006 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Lhx1P63006 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Lhx1P63006 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx1P63006 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.36■□□□□ 0.21
Lhx1P63006 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx1P63006 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx1P63006 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Lhx1P63006 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx1P63006 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx1P63006 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC16.36■□□□□ 0.21
Lhx1P63006 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx1P63006 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Lhx1P63006 Gm27742-201ENSMUST00000184667 60 ntBASIC16.36■□□□□ 0.21
Lhx1P63006 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx1P63006 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lhx1P63006 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC16.36■□□□□ 0.21
Lhx1P63006 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Lhx1P63006 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.36■□□□□ 0.21
Lhx1P63006 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Lhx1P63006 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Lhx1P63006 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lhx1P63006 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC16.35■□□□□ 0.21
Lhx1P63006 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Lhx1P63006 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Lhx1P63006 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Lhx1P63006 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.34■□□□□ 0.21
Lhx1P63006 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Lhx1P63006 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.34■□□□□ 0.21
Lhx1P63006 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Lhx1P63006 Pqlc1-208ENSMUST00000144468 1050 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Lhx1P63006 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC16.34■□□□□ 0.21
Lhx1P63006 Ank2-226ENSMUST00000189368 339 ntBASIC16.34■□□□□ 0.21
Lhx1P63006 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC16.34■□□□□ 0.21
Lhx1P63006 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms