Protein–RNA interactions for Protein: P62858

Rps28, 40S ribosomal protein S28, mousemouse

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rps28P62858 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Dpf1-203ENSMUST00000108230 1553 ntTSL 5 BASIC9.95□□□□□ -0.82
Rps28P62858 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Rps28P62858 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
Rps28P62858 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Rps28P62858 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
Rps28P62858 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Rps28P62858 Mapk8ip3-203ENSMUST00000115229 5603 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Rps28P62858 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC9.94□□□□□ -0.82
Rps28P62858 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC9.94□□□□□ -0.82
Rps28P62858 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Rps28P62858 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC9.94□□□□□ -0.82
Rps28P62858 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC9.94□□□□□ -0.82
Rps28P62858 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Rps28P62858 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
Rps28P62858 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Uqcrfs1-201ENSMUST00000042834 1363 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Gm12134-201ENSMUST00000122109 520 ntBASIC9.94□□□□□ -0.82
Rps28P62858 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC9.94□□□□□ -0.82
Rps28P62858 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Pllp-201ENSMUST00000034227 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Rps28P62858 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC9.93□□□□□ -0.82
Rps28P62858 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC9.93□□□□□ -0.82
Rps28P62858 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rps28P62858 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Gfod1-201ENSMUST00000055341 6928 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Prkab2-201ENSMUST00000045743 5006 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Nr0b1-201ENSMUST00000026036 1808 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Gm38577-201ENSMUST00000221531 4545 ntBASIC9.93□□□□□ -0.82
Rps28P62858 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rps28P62858 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC9.93□□□□□ -0.82
Rps28P62858 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC9.93□□□□□ -0.82
Rps28P62858 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC9.93□□□□□ -0.82
Rps28P62858 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC9.92□□□□□ -0.82
Rps28P62858 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Gm31518-201ENSMUST00000211925 2548 ntTSL 5 BASIC9.92□□□□□ -0.82
Rps28P62858 Efs-202ENSMUST00000227037 2540 ntBASIC9.92□□□□□ -0.82
Rps28P62858 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC9.92□□□□□ -0.82
Rps28P62858 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC9.92□□□□□ -0.82
Rps28P62858 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC9.92□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 39 ms