Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm26833-201ENSMUST00000180899 440 ntBASIC15.31■□□□□ 0.04
Lsm3P62311 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Gm9988-201ENSMUST00000069786 435 ntBASIC15.31■□□□□ 0.04
Lsm3P62311 Chst10-201ENSMUST00000027249 2975 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC15.31■□□□□ 0.04
Lsm3P62311 Hpn-209ENSMUST00000168884 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.31■□□□□ 0.04
Lsm3P62311 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Lsm3P62311 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC15.3■□□□□ 0.04
Lsm3P62311 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lsm3P62311 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lsm3P62311 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Crb2-201ENSMUST00000050372 6372 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
Lsm3P62311 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lsm3P62311 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC15.3■□□□□ 0.04
Lsm3P62311 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Lsm3P62311 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Lsm3P62311 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.3■□□□□ 0.04
Lsm3P62311 Prob1-201ENSMUST00000097619 3021 ntBASIC15.3■□□□□ 0.04
Lsm3P62311 Ptprs-211ENSMUST00000223859 5588 ntBASIC15.3■□□□□ 0.04
Lsm3P62311 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Lsm3P62311 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lsm3P62311 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Lsm3P62311 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Rufy3-205ENSMUST00000198965 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lsm3P62311 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Reep4-203ENSMUST00000226563 1444 ntBASIC15.29■□□□□ 0.04
Lsm3P62311 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Lsm3P62311 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Lsm3P62311 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Lsm3P62311 Cfap206-202ENSMUST00000108136 1688 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lsm3P62311 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 AC154412.1-201ENSMUST00000226540 2786 ntBASIC15.28■□□□□ 0.04
Lsm3P62311 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lsm3P62311 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC15.28■□□□□ 0.04
Lsm3P62311 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
Lsm3P62311 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC15.28■□□□□ 0.04
Lsm3P62311 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm3P62311 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Sybu-209ENSMUST00000228639 4113 ntBASIC15.28■□□□□ 0.04
Lsm3P62311 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC15.28■□□□□ 0.04
Lsm3P62311 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Lsm3P62311 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm3P62311 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
Lsm3P62311 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm3P62311 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm3P62311 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm3P62311 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
Lsm3P62311 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm3P62311 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
Lsm3P62311 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC15.27■□□□□ 0.04
Lsm3P62311 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.27■□□□□ 0.04
Lsm3P62311 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC15.27■□□□□ 0.04
Lsm3P62311 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms