Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 Gm45560-201ENSMUST00000211492 1472 ntBASIC14.83□□□□□ -0.03
Sf3b6P59708 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b6P59708 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Sf3b6P59708 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.83□□□□□ -0.04
Sf3b6P59708 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Gm20760-201ENSMUST00000179197 648 ntBASIC14.83□□□□□ -0.04
Sf3b6P59708 AC112142.1-201ENSMUST00000228796 918 ntBASIC14.83□□□□□ -0.04
Sf3b6P59708 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Slco3a1-201ENSMUST00000026897 4589 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Sf3b6P59708 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC14.82□□□□□ -0.04
Sf3b6P59708 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b6P59708 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b6P59708 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b6P59708 Mapk8ip1-201ENSMUST00000050312 2930 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b6P59708 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b6P59708 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC14.82□□□□□ -0.04
Sf3b6P59708 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b6P59708 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b6P59708 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b6P59708 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sf3b6P59708 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Sf3b6P59708 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b6P59708 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Sf3b6P59708 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Sf3b6P59708 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.81□□□□□ -0.04
Sf3b6P59708 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.81□□□□□ -0.04
Sf3b6P59708 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC14.81□□□□□ -0.04
Sf3b6P59708 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b6P59708 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC14.81□□□□□ -0.04
Sf3b6P59708 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Sf3b6P59708 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Rhobtb2-201ENSMUST00000022665 5322 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sf3b6P59708 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Lonrf2-202ENSMUST00000147695 6932 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b6P59708 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Gm17200-201ENSMUST00000170214 2022 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3b6P59708 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC14.8□□□□□ -0.04
Sf3b6P59708 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC14.8□□□□□ -0.04
Sf3b6P59708 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b6P59708 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Gm44616-201ENSMUST00000206417 1732 ntBASIC14.8□□□□□ -0.04
Sf3b6P59708 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC14.8□□□□□ -0.04
Sf3b6P59708 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sf3b6P59708 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sf3b6P59708 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Sf3b6P59708 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sf3b6P59708 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sf3b6P59708 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.79□□□□□ -0.04
Sf3b6P59708 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Gm12527-201ENSMUST00000117967 564 ntBASIC14.79□□□□□ -0.04
Sf3b6P59708 Gm12896-201ENSMUST00000118430 226 ntBASIC14.79□□□□□ -0.04
Sf3b6P59708 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sf3b6P59708 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms