Protein–RNA interactions for Protein: P58873

Rhbdl3, Rhomboid-related protein 3, mousemouse

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rhbdl3P58873 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rhbdl3P58873 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rhbdl3P58873 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rhbdl3P58873 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rhbdl3P58873 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rhbdl3P58873 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rhbdl3P58873 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.72■□□□□ 0.75
Rhbdl3P58873 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rhbdl3P58873 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.71■□□□□ 0.75
Rhbdl3P58873 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.75
Rhbdl3P58873 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.7■□□□□ 0.74
Rhbdl3P58873 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.7■□□□□ 0.74
Rhbdl3P58873 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rhbdl3P58873 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC19.69■□□□□ 0.74
Rhbdl3P58873 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rhbdl3P58873 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.69■□□□□ 0.74
Rhbdl3P58873 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.69■□□□□ 0.74
Rhbdl3P58873 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rhbdl3P58873 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Gm7862-201ENSMUST00000121461 292 ntBASIC19.68■□□□□ 0.74
Rhbdl3P58873 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Rhbdl3P58873 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rhbdl3P58873 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rhbdl3P58873 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rhbdl3P58873 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rhbdl3P58873 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rhbdl3P58873 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rhbdl3P58873 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Rhbdl3P58873 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC19.67■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 18.9 ms