Protein–RNA interactions for Protein: P58771

Tpm1, Tropomyosin alpha-1 chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1P58771 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
Tpm1P58771 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Aldh1a3-204ENSMUST00000174215 1066 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Gm2559-201ENSMUST00000201323 363 ntBASIC18.65■□□□□ 0.58
Tpm1P58771 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC18.65■□□□□ 0.58
Tpm1P58771 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tpm1P58771 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
Tpm1P58771 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
Tpm1P58771 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
Tpm1P58771 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm1P58771 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm1P58771 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm1P58771 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Tpm1P58771 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
Tpm1P58771 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm1P58771 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm1P58771 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm1P58771 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC18.64■□□□□ 0.57
Tpm1P58771 Gm26571-201ENSMUST00000181399 666 ntBASIC18.64■□□□□ 0.57
Tpm1P58771 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm1P58771 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm1P58771 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm1P58771 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Tpm1P58771 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC18.63■□□□□ 0.57
Tpm1P58771 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
Tpm1P58771 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC18.63■□□□□ 0.57
Tpm1P58771 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC18.63■□□□□ 0.57
Tpm1P58771 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
Tpm1P58771 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
Tpm1P58771 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC18.62■□□□□ 0.57
Tpm1P58771 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC18.62■□□□□ 0.57
Tpm1P58771 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.62■□□□□ 0.57
Tpm1P58771 Rcc2-202ENSMUST00000071169 3999 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC18.62■□□□□ 0.57
Tpm1P58771 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
Tpm1P58771 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.61■□□□□ 0.57
Tpm1P58771 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.61■□□□□ 0.57
Tpm1P58771 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
Tpm1P58771 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC18.61■□□□□ 0.57
Tpm1P58771 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
Tpm1P58771 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
Tpm1P58771 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC18.61■□□□□ 0.57
Tpm1P58771 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
Tpm1P58771 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
Tpm1P58771 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms