Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 AC133083.1-201ENSMUST00000221736 2209 ntBASIC18.92■□□□□ 0.62
Usp25P57080 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC18.92■□□□□ 0.62
Usp25P57080 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC18.92■□□□□ 0.62
Usp25P57080 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Gm2559-201ENSMUST00000201323 363 ntBASIC18.92■□□□□ 0.62
Usp25P57080 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
Usp25P57080 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
Usp25P57080 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC18.92■□□□□ 0.62
Usp25P57080 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC18.91■□□□□ 0.62
Usp25P57080 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
Usp25P57080 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Apeh-206ENSMUST00000193254 2518 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC18.91■□□□□ 0.62
Usp25P57080 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC18.91■□□□□ 0.62
Usp25P57080 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp25P57080 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
Usp25P57080 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 AC093043.3-201ENSMUST00000226531 2273 ntBASIC18.91■□□□□ 0.62
Usp25P57080 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
Usp25P57080 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC18.91■□□□□ 0.62
Usp25P57080 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Usp25P57080 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Usp25P57080 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
Usp25P57080 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Usp25P57080 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC18.9■□□□□ 0.62
Usp25P57080 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp25P57080 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Cnksr2-201ENSMUST00000026750 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Usp25P57080 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC18.9■□□□□ 0.62
Usp25P57080 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Usp25P57080 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp25P57080 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp25P57080 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp25P57080 CT010444.2-201ENSMUST00000217877 1629 ntBASIC18.89■□□□□ 0.62
Usp25P57080 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.62
Usp25P57080 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp25P57080 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp25P57080 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Tomm6-201ENSMUST00000113301 594 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
Usp25P57080 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC18.89■□□□□ 0.61
Usp25P57080 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC18.89■□□□□ 0.61
Usp25P57080 Gm4974-201ENSMUST00000209974 875 ntBASIC18.89■□□□□ 0.61
Usp25P57080 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.89■□□□□ 0.61
Usp25P57080 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC18.89■□□□□ 0.61
Usp25P57080 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Usp25P57080 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC18.89■□□□□ 0.61
Usp25P57080 Gm43072-201ENSMUST00000200283 1671 ntBASIC18.89■□□□□ 0.61
Usp25P57080 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC18.88■□□□□ 0.61
Usp25P57080 Epor-201ENSMUST00000006397 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Usp25P57080 Gm12441-201ENSMUST00000121806 588 ntBASIC18.88■□□□□ 0.61
Usp25P57080 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC18.88■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 19.8 ms