Protein–RNA interactions for Protein: P54285

Cacnb3, Voltage-dependent L-type calcium channel subunit beta-3, mousemouse

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacnb3P54285 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC19.41■□□□□ 0.7
Cacnb3P54285 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cacnb3P54285 Gm9449-201ENSMUST00000207265 1011 ntBASIC19.41■□□□□ 0.7
Cacnb3P54285 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cacnb3P54285 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.41■□□□□ 0.7
Cacnb3P54285 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
Cacnb3P54285 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cacnb3P54285 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
Cacnb3P54285 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
Cacnb3P54285 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Gm7862-201ENSMUST00000121461 292 ntBASIC19.4■□□□□ 0.7
Cacnb3P54285 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Tsfm-207ENSMUST00000152054 655 ntTSL 3 BASIC19.4■□□□□ 0.7
Cacnb3P54285 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.4■□□□□ 0.7
Cacnb3P54285 Mir5131-201ENSMUST00000175426 93 ntBASIC19.4■□□□□ 0.7
Cacnb3P54285 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
Cacnb3P54285 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Cacnb3P54285 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cacnb3P54285 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Cacnb3P54285 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Cacnb3P54285 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.39■□□□□ 0.69
Cacnb3P54285 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacnb3P54285 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacnb3P54285 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
Cacnb3P54285 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC19.39■□□□□ 0.69
Cacnb3P54285 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC19.39■□□□□ 0.69
Cacnb3P54285 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC19.39■□□□□ 0.69
Cacnb3P54285 AC138767.1-201ENSMUST00000222661 415 ntBASIC19.39■□□□□ 0.69
Cacnb3P54285 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacnb3P54285 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
Cacnb3P54285 Hhipl1-201ENSMUST00000021685 5174 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacnb3P54285 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Cacnb3P54285 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Cacnb3P54285 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Cacnb3P54285 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cacnb3P54285 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Cacnb3P54285 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Cacnb3P54285 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Cacnb3P54285 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
Cacnb3P54285 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC19.37■□□□□ 0.69
Cacnb3P54285 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.37■□□□□ 0.69
Cacnb3P54285 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Cacnb3P54285 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Slc30a9-204ENSMUST00000162372 5711 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
Cacnb3P54285 Plekhg3-201ENSMUST00000075249 5138 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Cacnb3P54285 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cacnb3P54285 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cacnb3P54285 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Cacnb3P54285 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC19.36■□□□□ 0.69
Cacnb3P54285 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Napa-201ENSMUST00000006181 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Cacnb3P54285 Smpd5-202ENSMUST00000163991 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms