Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC16.91■□□□□ 0.3
Lhx3P50481 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Lhx3P50481 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx3P50481 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Fam20c-201ENSMUST00000026972 3582 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Lhx3P50481 Gm27704-201ENSMUST00000185094 107 ntBASIC16.9■□□□□ 0.3
Lhx3P50481 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 AC130713.1-201ENSMUST00000228853 1096 ntBASIC16.9■□□□□ 0.3
Lhx3P50481 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx3P50481 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC16.9■□□□□ 0.3
Lhx3P50481 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Lhx3P50481 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Lhx3P50481 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Lhx3P50481 Gm13216-201ENSMUST00000117145 591 ntBASIC16.89■□□□□ 0.29
Lhx3P50481 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC16.89■□□□□ 0.29
Lhx3P50481 Gm45328-201ENSMUST00000210942 917 ntBASIC16.89■□□□□ 0.29
Lhx3P50481 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Lhx3P50481 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Ubr5-201ENSMUST00000110336 9242 ntTSL 5 BASIC16.89■□□□□ 0.29
Lhx3P50481 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Lhx3P50481 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Lhx3P50481 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.89■□□□□ 0.29
Lhx3P50481 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Lhx3P50481 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lhx3P50481 Slc35b2-202ENSMUST00000223987 1766 ntBASIC16.88■□□□□ 0.29
Lhx3P50481 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Gm21362-201ENSMUST00000194272 928 ntBASIC16.88■□□□□ 0.29
Lhx3P50481 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Gm7367-201ENSMUST00000057611 492 ntBASIC16.88■□□□□ 0.29
Lhx3P50481 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Lhx3P50481 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC16.88■□□□□ 0.29
Lhx3P50481 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Lhx3P50481 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
Lhx3P50481 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.87■□□□□ 0.29
Lhx3P50481 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Gm15442-201ENSMUST00000117905 1527 ntBASIC16.87■□□□□ 0.29
Lhx3P50481 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.87■□□□□ 0.29
Lhx3P50481 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 1700025L06Rik-203ENSMUST00000211477 1623 ntTSL 5 BASIC16.87■□□□□ 0.29
Lhx3P50481 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Lhx3P50481 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.86■□□□□ 0.29
Lhx3P50481 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 23.1 ms