Protein–RNA interactions for Protein: P48432

Sox2, Transcription factor SOX-2, mousemouse

Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox2P48432 Ly6e-201ENSMUST00000051698 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.69■□□□□ 0.1
Sox2P48432 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Sox2P48432 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC15.69■□□□□ 0.1
Sox2P48432 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Sox2P48432 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Sox2P48432 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox2P48432 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox2P48432 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.68■□□□□ 0.1
Sox2P48432 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Sox2P48432 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Sox2P48432 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Sox2P48432 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox2P48432 Gm11249-201ENSMUST00000117071 859 ntBASIC15.67■□□□□ 0.1
Sox2P48432 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC15.67■□□□□ 0.1
Sox2P48432 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
Sox2P48432 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC15.67■□□□□ 0.1
Sox2P48432 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Sox2P48432 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.67■□□□□ 0.1
Sox2P48432 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
Sox2P48432 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Sox2P48432 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Sox2P48432 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Sox2P48432 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC15.66■□□□□ 0.1
Sox2P48432 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Gm12896-201ENSMUST00000118430 226 ntBASIC15.66■□□□□ 0.1
Sox2P48432 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC15.66■□□□□ 0.1
Sox2P48432 Gm42545-201ENSMUST00000202755 922 ntBASIC15.66■□□□□ 0.1
Sox2P48432 Gm4974-201ENSMUST00000209974 875 ntBASIC15.66■□□□□ 0.1
Sox2P48432 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Sox2P48432 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.66■□□□□ 0.1
Sox2P48432 Kdelc2-201ENSMUST00000037853 3642 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Sox2P48432 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox2P48432 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox2P48432 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Sdr39u1-201ENSMUST00000111325 1255 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC15.65■□□□□ 0.1
Sox2P48432 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC15.65■□□□□ 0.1
Sox2P48432 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.65■□□□□ 0.1
Sox2P48432 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Sox2P48432 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Sox2P48432 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms