Protein–RNA interactions for Protein: P46467

Vps4b, Vacuolar protein sorting-associated protein 4B, mousemouse

Known RBP Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps4bP46467 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4bP46467 Gm715-201ENSMUST00000117865 831 ntBASIC16.92■□□□□ 0.3
Vps4bP46467 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps4bP46467 Gm18958-201ENSMUST00000174258 762 ntBASIC16.92■□□□□ 0.3
Vps4bP46467 AL672049.1-201ENSMUST00000197943 91 ntBASIC16.92■□□□□ 0.3
Vps4bP46467 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps4bP46467 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4bP46467 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4bP46467 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Vps4bP46467 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4bP46467 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4bP46467 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4bP46467 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4bP46467 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.92■□□□□ 0.3
Vps4bP46467 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Vps4bP46467 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps4bP46467 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.91■□□□□ 0.3
Vps4bP46467 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps4bP46467 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Vps4bP46467 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.91■□□□□ 0.3
Vps4bP46467 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Vps4bP46467 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC16.91■□□□□ 0.3
Vps4bP46467 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps4bP46467 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Vps4bP46467 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Vps4bP46467 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Vps4bP46467 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Vps4bP46467 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Vps4bP46467 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.9■□□□□ 0.3
Vps4bP46467 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Vps4bP46467 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Vps4bP46467 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Vps4bP46467 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Vps4bP46467 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps4bP46467 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC16.89■□□□□ 0.29
Vps4bP46467 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Vps4bP46467 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
Vps4bP46467 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC16.89■□□□□ 0.29
Vps4bP46467 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Vps4bP46467 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vps4bP46467 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Ttl-201ENSMUST00000035812 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Vps4bP46467 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4bP46467 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4bP46467 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4bP46467 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4bP46467 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.88■□□□□ 0.29
Vps4bP46467 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4bP46467 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Vps4bP46467 AC153881.1-201ENSMUST00000214448 284 ntBASIC16.88■□□□□ 0.29
Vps4bP46467 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.88■□□□□ 0.29
Vps4bP46467 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.88■□□□□ 0.29
Vps4bP46467 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vps4bP46467 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vps4bP46467 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.88■□□□□ 0.29
Vps4bP46467 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
Vps4bP46467 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Vps4bP46467 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms