Protein–RNA interactions for Protein: P43407

Sdc2, Syndecan-2, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc2P43407 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC18.72■□□□□ 0.59
Sdc2P43407 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sdc2P43407 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sdc2P43407 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sdc2P43407 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC18.71■□□□□ 0.59
Sdc2P43407 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Gm18958-201ENSMUST00000174258 762 ntBASIC18.71■□□□□ 0.59
Sdc2P43407 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sdc2P43407 Timm23-208ENSMUST00000226683 750 ntBASIC18.71■□□□□ 0.59
Sdc2P43407 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sdc2P43407 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
Sdc2P43407 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Sdc2P43407 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sdc2P43407 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sdc2P43407 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Sdc2P43407 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC18.7■□□□□ 0.58
Sdc2P43407 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
Sdc2P43407 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC18.7■□□□□ 0.58
Sdc2P43407 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18.7■□□□□ 0.58
Sdc2P43407 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sdc2P43407 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sdc2P43407 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
Sdc2P43407 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sdc2P43407 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Gm8520-201ENSMUST00000186517 868 ntBASIC18.69■□□□□ 0.58
Sdc2P43407 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC18.69■□□□□ 0.58
Sdc2P43407 Gm7791-201ENSMUST00000219066 539 ntBASIC18.69■□□□□ 0.58
Sdc2P43407 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
Sdc2P43407 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
Sdc2P43407 Ep300-201ENSMUST00000068387 9566 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sdc2P43407 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
Sdc2P43407 Tmem267-205ENSMUST00000223912 1789 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sdc2P43407 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
Sdc2P43407 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC18.68■□□□□ 0.58
Sdc2P43407 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC18.68■□□□□ 0.58
Sdc2P43407 AC156016.1-201ENSMUST00000227190 1035 ntBASIC18.68■□□□□ 0.58
Sdc2P43407 Otx2os1-204ENSMUST00000227221 751 ntBASIC18.68■□□□□ 0.58
Sdc2P43407 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.68■□□□□ 0.58
Sdc2P43407 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sdc2P43407 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms