Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Crct1-202ENSMUST00000107301 460 ntAPPRIS P1 TSL 2 BASIC13.66□□□□□ -0.22
Timp3P39876 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Timp3P39876 Gm5587-201ENSMUST00000206270 674 ntBASIC13.66□□□□□ -0.22
Timp3P39876 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Timp3P39876 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
Timp3P39876 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Timp3P39876 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Timp3P39876 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Timp3P39876 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Timp3P39876 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Timp3P39876 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Timp3P39876 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC13.66□□□□□ -0.22
Timp3P39876 Dancr-204ENSMUST00000132389 2347 ntBASIC13.65□□□□□ -0.22
Timp3P39876 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC13.65□□□□□ -0.22
Timp3P39876 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Gm14859-201ENSMUST00000117752 357 ntBASIC13.65□□□□□ -0.22
Timp3P39876 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC13.65□□□□□ -0.22
Timp3P39876 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.65□□□□□ -0.22
Timp3P39876 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.65□□□□□ -0.22
Timp3P39876 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC13.65□□□□□ -0.22
Timp3P39876 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC13.65□□□□□ -0.22
Timp3P39876 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Timp3P39876 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Timp3P39876 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp3P39876 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp3P39876 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp3P39876 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC13.64□□□□□ -0.23
Timp3P39876 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Timp3P39876 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Timp3P39876 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC13.64□□□□□ -0.23
Timp3P39876 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
Timp3P39876 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Timp3P39876 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Timp3P39876 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC13.63□□□□□ -0.23
Timp3P39876 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Timp3P39876 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Timp3P39876 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC13.63□□□□□ -0.23
Timp3P39876 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Timp3P39876 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC13.63□□□□□ -0.23
Timp3P39876 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.63□□□□□ -0.23
Timp3P39876 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.63□□□□□ -0.23
Timp3P39876 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC13.63□□□□□ -0.23
Timp3P39876 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Timp3P39876 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Timp3P39876 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Cacna2d2-203ENSMUST00000164988 5542 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Timp3P39876 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Timp3P39876 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC13.62□□□□□ -0.23
Timp3P39876 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC13.62□□□□□ -0.23
Timp3P39876 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC13.62□□□□□ -0.23
Timp3P39876 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Timp3P39876 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms