Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
HmgclP38060 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC16.43■□□□□ 0.22
HmgclP38060 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
HmgclP38060 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.43■□□□□ 0.22
HmgclP38060 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.43■□□□□ 0.22
HmgclP38060 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
HmgclP38060 Gm26596-201ENSMUST00000180464 2655 ntBASIC16.42■□□□□ 0.22
HmgclP38060 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
HmgclP38060 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Gm11336-201ENSMUST00000118168 334 ntBASIC16.42■□□□□ 0.22
HmgclP38060 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.42■□□□□ 0.22
HmgclP38060 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.42■□□□□ 0.22
HmgclP38060 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Gm22697-201ENSMUST00000175194 63 ntBASIC16.42■□□□□ 0.22
HmgclP38060 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Gm27389-201ENSMUST00000183622 195 ntBASIC16.42■□□□□ 0.22
HmgclP38060 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC16.42■□□□□ 0.22
HmgclP38060 Gm18032-201ENSMUST00000222541 538 ntBASIC16.42■□□□□ 0.22
HmgclP38060 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.42■□□□□ 0.22
HmgclP38060 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
HmgclP38060 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
HmgclP38060 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Gm16759-201ENSMUST00000126238 1393 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC16.41■□□□□ 0.22
HmgclP38060 Gm21559-201ENSMUST00000220638 855 ntBASIC16.41■□□□□ 0.22
HmgclP38060 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
HmgclP38060 Gm8587-201ENSMUST00000076538 843 ntBASIC16.41■□□□□ 0.22
HmgclP38060 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
HmgclP38060 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC16.41■□□□□ 0.22
HmgclP38060 Lonp2-201ENSMUST00000034141 2860 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
HmgclP38060 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
HmgclP38060 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Sf1-202ENSMUST00000113487 2649 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Gm10231-201ENSMUST00000181584 441 ntBASIC16.4■□□□□ 0.22
HmgclP38060 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Gm10175-202ENSMUST00000208752 441 ntBASIC16.4■□□□□ 0.22
HmgclP38060 Gm18101-201ENSMUST00000215769 548 ntBASIC16.4■□□□□ 0.22
HmgclP38060 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC16.4■□□□□ 0.22
HmgclP38060 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
HmgclP38060 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
HmgclP38060 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 198.1 ms