Protein–RNA interactions for Protein: P29533

Vcam1, Vascular cell adhesion protein 1, mousemouse

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vcam1P29533 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vcam1P29533 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
Vcam1P29533 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
Vcam1P29533 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vcam1P29533 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Vcam1P29533 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
Vcam1P29533 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC19.14■□□□□ 0.65
Vcam1P29533 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vcam1P29533 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Vcam1P29533 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Vcam1P29533 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Vcam1P29533 Gm1818-201ENSMUST00000169406 1184 ntBASIC19.13■□□□□ 0.65
Vcam1P29533 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC19.13■□□□□ 0.65
Vcam1P29533 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC19.13■□□□□ 0.65
Vcam1P29533 AW822252-206ENSMUST00000208904 237 ntBASIC19.13■□□□□ 0.65
Vcam1P29533 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Vcam1P29533 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Vcam1P29533 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Vcam1P29533 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Vcam1P29533 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Snrpf-201ENSMUST00000020203 861 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
Vcam1P29533 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Vcam1P29533 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Gm2694-204ENSMUST00000181898 1303 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC19.11■□□□□ 0.65
Vcam1P29533 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Gm13830-205ENSMUST00000201195 1155 ntBASIC19.11■□□□□ 0.65
Vcam1P29533 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Vcam1P29533 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC19.11■□□□□ 0.65
Vcam1P29533 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Vcam1P29533 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
Vcam1P29533 Drd2-201ENSMUST00000075764 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC19.11■□□□□ 0.65
Vcam1P29533 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Vcam1P29533 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
Vcam1P29533 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC19.1■□□□□ 0.65
Vcam1P29533 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
Vcam1P29533 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Btbd10-203ENSMUST00000119278 2394 ntTSL 5 BASIC19.1■□□□□ 0.65
Vcam1P29533 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC19.1■□□□□ 0.65
Vcam1P29533 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC19.1■□□□□ 0.65
Vcam1P29533 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 AC161829.1-201ENSMUST00000220298 281 ntBASIC19.1■□□□□ 0.65
Vcam1P29533 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.1■□□□□ 0.65
Vcam1P29533 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Vcam1P29533 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.1■□□□□ 0.65
Vcam1P29533 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
Vcam1P29533 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Nosip-201ENSMUST00000003513 1814 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC19.09■□□□□ 0.65
Vcam1P29533 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
Vcam1P29533 Oip5-202ENSMUST00000123818 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms