Protein–RNA interactions for Protein: P28660

Nckap1, Nck-associated protein 1, mousemouse

Known RBP Predictions only

Length 1,128 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nckap1P28660 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nckap1P28660 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.59■□□□□ 0.25
Nckap1P28660 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Nckap1P28660 Gm29707-201ENSMUST00000196325 491 ntBASIC16.59■□□□□ 0.25
Nckap1P28660 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Nckap1P28660 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nckap1P28660 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nckap1P28660 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nckap1P28660 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
Nckap1P28660 Ldlrad4-201ENSMUST00000063775 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nckap1P28660 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
Nckap1P28660 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.58■□□□□ 0.24
Nckap1P28660 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC16.58■□□□□ 0.24
Nckap1P28660 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Nckap1P28660 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.58■□□□□ 0.24
Nckap1P28660 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.58■□□□□ 0.24
Nckap1P28660 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 Wnt10b-204ENSMUST00000226655 1807 ntBASIC16.58■□□□□ 0.24
Nckap1P28660 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
Nckap1P28660 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.58■□□□□ 0.24
Nckap1P28660 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Nckap1P28660 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Acvr2b-205ENSMUST00000215746 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Gm24589-201ENSMUST00000116692 94 ntBASIC16.57■□□□□ 0.24
Nckap1P28660 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
Nckap1P28660 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Nckap1P28660 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC16.57■□□□□ 0.24
Nckap1P28660 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Nckap1P28660 Gm7461-201ENSMUST00000058918 827 ntBASIC16.57■□□□□ 0.24
Nckap1P28660 Cebpzos-201ENSMUST00000063817 753 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Nckap1P28660 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC16.57■□□□□ 0.24
Nckap1P28660 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
Nckap1P28660 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Nckap1P28660 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
Nckap1P28660 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC16.56■□□□□ 0.24
Nckap1P28660 Gm18421-201ENSMUST00000204122 625 ntBASIC16.56■□□□□ 0.24
Nckap1P28660 AC125350.1-201ENSMUST00000225115 903 ntBASIC16.56■□□□□ 0.24
Nckap1P28660 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC16.56■□□□□ 0.24
Nckap1P28660 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Nckap1P28660 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nckap1P28660 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Nckap1P28660 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nckap1P28660 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Nckap1P28660 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC16.55■□□□□ 0.24
Nckap1P28660 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC16.55■□□□□ 0.24
Nckap1P28660 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Gm44450-201ENSMUST00000199528 114 ntBASIC16.55■□□□□ 0.24
Nckap1P28660 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nckap1P28660 Pnmt-201ENSMUST00000041301 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC16.55■□□□□ 0.24
Nckap1P28660 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Nckap1P28660 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Nckap1P28660 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms